Ramkrishna Mitra
Ramkrishna Mitra
Research Instructor, Thomas Jefferson University
Verified email at jefferson.edu
Title
Cited by
Cited by
Year
Development of the human cancer microRNA network
S Bandyopadhyay, R Mitra, U Maulik, MQ Zhang
Silence 1 (1), 6, 2010
2192010
TargetMiner: microRNA target prediction with systematic identification of tissue-specific negative examples
S Bandyopadhyay, R Mitra (corresponding author)
Bioinformatics 25 (20), 2625-2631, 2009
2002009
TSGene 2.0: an updated literature-based knowledgebase for tumor suppressor genes
M Zhao, P Kim, R Mitra, J Zhao, Z Zhao
Nucleic acids research 44 (D1), D1023-D1031, 2016
1322016
Decoding critical long non-coding RNA in ovarian cancer epithelial-to-mesenchymal transition
R Mitra, X Chen, EJ Greenawalt, U Maulik, W Jiang, Z Zhao, ...
Nature Communications, 2017
802017
MicroRNA-31 initiates lung tumorigenesis and promotes mutant KRAS-driven lung cancer
MD Edmonds, KL Boyd, T Moyo, R Mitra, R Duszynski, MP Arrate, X Chen, ...
The Journal of clinical investigation 126 (1), 349-364, 2016
592016
Reproducible combinatorial regulatory networks elucidate novel oncogenic microRNAs in non-small cell lung cancer
R Mitra, MD Edmonds, J Sun, M Zhao, H Yu, CM Eischen, Z Zhao
Rna 20 (9), 1356-1368, 2014
492014
MBSTAR: multiple instance learning for predicting specific functional binding sites in microRNA targets
S Bandyopadhyay, D Ghosh, R Mitra, Z Zhao
Scientific reports 5 (1), 1-12, 2015
452015
MultiMiTar: a novel multi objective optimization based miRNA-target prediction method
R Mitra, S Bandyopadhyay
PloS one 6 (9), e24583, 2011
442011
Systematic dissection of dysregulated transcription factor–miRNA feed-forward loops across tumor types
W Jiang, R Mitra(co-first author), CC Lin, Q Wang, F Cheng, Z Zhao
Briefings in bioinformatics 17 (6), 996-1008, 2015
322015
The Potential Roles of Long Noncoding RNAs (lncRNA) in Glioblastoma Development
S Liu, R Mitra (co-first author), MM Zhao, W Fan, CM Eischen, F Yin, ...
Molecular cancer therapeutics 15 (12), 2977-2986, 2016
302016
Concordant dysregulation of miR-5p and miR-3p arms of the same precursor microRNA may be a mechanism in inducing cell proliferation and tumorigenesis: a lung cancer study
R Mitra, CC Lin, CM Eischen, S Bandyopadhyay, Z Zhao
Rna 21 (6), 1055-1065, 2015
242015
Regulation rewiring analysis reveals mutual regulation between STAT1 and miR-155-5p in tumor immunosurveillance in seven major cancers
CC Lin, W Jiang, R Mitra(co-first author), F Cheng, H Yu, Z Zhao
Scientific reports 5, 2015
202015
Mdm2 is required for survival and growth of p53-deficient cancer cells
K Feeley, CM Adams, R Mitra, CM Eischen
Cancer Research, 2017
172017
BCL-W has a fundamental role in B cell survival and lymphomagenesis
CM Adams, AS Kim, R Mitra, JK Choi, JZ Gong, CM Eischen
The Journal of clinical investigation 127 (2), 635-650, 2017
172017
Non-Hodgkin and Hodgkin lymphomas select for overexpression of BCLW
CM Adams, R Mitra (co-first author), J Gong, CM Eischen
Clinical Cancer Research 23 (22), 7119-7129, 2017
132017
A parallel pairwise local sequence alignment algorithm
S Bandyopadhyay, R Mitra(corresponding author)
IEEE transactions on nanobioscience 8 (2), 139-146, 2009
132009
The homing and inhibiting effects of hNSCs-BMP4 on human glioma stem cells
S Liu, F Yin, M Zhao, C Zhou, J Ren, Q Huang, Z Zhao, R Mitra, W Fan, ...
Oncotarget 7 (14), 17920, 2016
122016
microRNA regulation in cancer: One arm or two arms?
R Mitra, J Sun, Z Zhao
International Journal of Cancer, 2015
102015
A cross-cancer differential co-expression network reveals microRNA-regulated oncogenic functional modules
CC Lin, R Mitra, F Cheng, Z Zhao
Molecular biosystems 11 (12), 3244-3252, 2015
102015
SFSSClass: an integrated approach for miRNA based tumor classification
R Mitra, S Bandyopadhyay, U Maulik, MQ Zhang
BMC bioinformatics 11 (S1), S22, 2010
102010
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Articles 1–20