| PanWeb: a web interface for pan-genomic analysis Y Pantoja, K Pinheiro, A Veras, F Araújo, A Lopes de Sousa, ... PLoS One 12 (5), e0178154, 2017 | 30 | 2017 |
| GapBlaster—a graphical gap filler for prokaryote genomes PHCG de Sa, F Miranda, A Veras, DM de Melo, S Soares, K Pinheiro, ... PLoS One 11 (5), e0155327, 2016 | 29 | 2016 |
| PhageWeb–Web interface for rapid identification and characterization of prophages in bacterial genomes AL Sousa, D Maués, A Lobato, EF Franco, K Pinheiro, F Araújo, Y Pantoja, ... Frontiers in genetics 9, 420426, 2018 | 28 | 2018 |
| Assessing the Genotypic Differences between Strains of Corynebacterium pseudotuberculosis biovar equi through Comparative Genomics RA Baraúna, RTJ Ramos, AAO Veras, KC Pinheiro, LJ Benevides, ... PLoS One 12 (1), e0170676, 2017 | 21 | 2017 |
| Pan4Draft: a computational tool to improve the accuracy of pan-genomic analysis using draft genomes A Veras, F Araujo, K Pinheiro, L Guimarães, V Azevedo, S Soares, ... Scientific reports 8 (1), 9670, 2018 | 14 | 2018 |
| The impact of quality filter for RNA-Seq PHCG de Sá, AAO Veras, AR Carneiro, KC Pinheiro, AC Pinto, ... Gene 563 (2), 165-171, 2015 | 12 | 2015 |
| Efficiency of Corynebacterium pseudotuberculosis Cp31 genome assembly with the Hi-Q enzyme on an Ion Torrent PGM sequencing platform AAO Veras, P de Sá, KC Pinheiro, D Assis das Graças, ... J Proteomics Bioinform 7, 374-378, 2014 | 12 | 2014 |
| Draft genome sequence of Trametes villosa (Sw.) Kreisel CCMB561, a tropical white-rot Basidiomycota from the semiarid region of Brazil DSS Ferreira, RB Kato, FM Miranda, K da Costa Pinheiro, PLC Fonseca, ... Data in brief 18, 1581-1587, 2018 | 10 | 2018 |
| Genome Sequence of Corynebacterium pseudotuberculosis MB20 bv. equi Isolated from a Pectoral Abscess of an Oldenburg Horse in California RA Baraúna, LC Guimarães, AAO Veras, PHCG de Sá, DA Graças, ... Genome announcements 2 (6), 10.1128/genomea. 00977-14, 2014 | 9 | 2014 |
| Viral metagenomics reveals widely diverse viral community of Freshwater Amazonian Lake WG Nogueira, BVA Gois, KC Pinheiro, AO Aragão, ALC Queiroz, AL Silva, ... Frontiers in Public Health 10, 869886, 2022 | 4 | 2022 |
| Bioinformatics approaches applied in pan-genomics and their challenges Y Pantoja, K da Costa Pinheiro, F Araujo, AL da Costa Silva, R Ramos Pan-genomics: Applications, Challenges, and Future Prospects, 43-64, 2020 | 3 | 2020 |
| Computational techniques in data integration and big data handling in omics AA de Oliveira Veras, PHCG De Sá, K da Costa Pinheiro, D Barh, ... Omics Technologies and Bio-Engineering, 209-222, 2018 | 3 | 2018 |
| In silico approach to identify microsatellite candidate biomarkers to differentiate the biovar of Corynebacterium pseudotuberculosis genomes KC Pinheiro, BVA Gois, WG Nogueira, FA Araújo, ALC Queiroz, ... Frontiers in Bioinformatics 2, 931583, 2022 | 2 | 2022 |
| Bioinformatics on the road: taking training to students and researchers beyond state capitals M Braga, F Araujo, E Franco, K Pinheiro, J Silva, D Maués, S Neto, ... Frontiers in Education 6, 726930, 2021 | 2 | 2021 |
| Draft genome sequence of Corynebacterium pseudotuberculosis Strain PA05 isolated from an ovine host in Pará State, Brazil ACS Lima, VAG de Moura, KC Pinheiro, CTM Paixão, WLO da Costa, ... Genome Announcements 5 (13), 10.1128/genomea. 00082-17, 2017 | 1 | 2017 |
| Corynebacterium pseudotuberculosis RNA-seq data from abiotic stresses PHCG de Sá, AAO Veras, AR Carneiro, RA Baraúna, LC Guimarães, ... Data in brief 5, 963-966, 2015 | 1 | 2015 |
| Environmental health of water bodies from a Brazilian Amazon Metropolis based on a conventional and metagenomic approach JAM Siqueira, DM Teixeira, GJL da Piedade, CO Souza, TCF Moura, ... Journal of Applied Microbiology 135 (5), lxae101, 2024 | | 2024 |
| Detection of bacteriophages and cyanophages for water quality control of a water supply system in Amazônia BVA Gois, K da Costa Pinheiro, WG Nogueira, A de Oliveira Aragão, ... | | 2021 |
| Redundancy Treatment of NGS Contigs in Microbial Genome Finishing with Hashing-Based Approach M Braga, K Pinheiro, F Araújo, F Miranda, A Silva, R Ramos Brazilian Symposium on Bioinformatics, 13-24, 2020 | | 2020 |
| 9 Next-Generation Sequencing R de Azevedo Baraúna, AA de Oliveira, K da Costa Pinheiro, RTJ Ramos, ... Molecular Diversity of Environmental Prokaryotes, 229, 2016 | | 2016 |
