Samuel H Payne
Samuel H Payne
Associate Professor, Brigham Young University
Verified email at byu.edu
TitleCited byYear
A multidimensional chromatography technology for in-depth phosphoproteome analysis
CP Albuquerque, MB Smolka, SH Payne, V Bafna, J Eng, H Zhou
Molecular & Cellular Proteomics 7 (7), 1389-1396, 2008
4722008
Integrated proteogenomic characterization of human high-grade serous ovarian cancer
H Zhang, T Liu, Z Zhang, SH Payne, B Zhang, JE McDermott, JY Zhou, ...
Cell 166 (3), 755-765, 2016
3512016
Discovery and revision of Arabidopsis genes by proteogenomics
NE Castellana, SH Payne, Z Shen, M Stanke, V Bafna, SP Briggs
Proceedings of the national academy of sciences 105 (52), 21034-21038, 2008
2702008
Population-based sample reveals gene–gender interactions in blood pressure in White Americans
BK Rana, PA Insel, SH Payne, K Abel, E Beutler, MG Ziegler, NJ Schork, ...
Hypertension 49 (1), 96-106, 2007
1252007
Retention and loss of amino acid biosynthetic pathways based on analysis of whole-genome sequences
SH Payne, WF Loomis
Eukaryotic cell 5 (2), 272-276, 2006
992006
Peptide-centric proteome analysis: an alternative strategy for the analysis of tandem mass spectrometry data
YS Ting, JD Egertson, SH Payne, S Kim, B MacLean, L Käll, R Aebersold, ...
Molecular & Cellular Proteomics 14 (9), 2301-2307, 2015
782015
The utility of protein and mRNA correlation
SH Payne
Trends in biochemical sciences 40 (1), 1-3, 2015
782015
An analysis of the sensitivity of proteogenomic mapping of somatic mutations and novel splicing events in cancer
KV Ruggles, Z Tang, X Wang, H Grover, M Askenazi, J Teubl, S Cao, ...
Molecular & Cellular Proteomics 15 (3), 1060-1071, 2016
692016
Proteogenomic analysis of bacteria and archaea: a 46 organism case study
E Venter, RD Smith, SH Payne
PloS one 6 (11), 2011
662011
Methods, tools and current perspectives in proteogenomics
KV Ruggles, K Krug, X Wang, KR Clauser, J Wang, SH Payne, D Fenyö, ...
Molecular & Cellular Proteomics 16 (6), 959-981, 2017
622017
Accurate annotation of peptide modifications through unrestrictive database search
S Tanner, SH Payne, S Dasari, Z Shen, PA Wilmarth, LL David, ...
Journal of proteome research 7 (01), 170-181, 2008
602008
A proteogenomic update to Yersinia: enhancing genome annotation
SH Payne, ST Huang, R Pieper
BMC genomics 11 (1), 460, 2010
592010
Phosphorylation-specific MS/MS scoring for rapid and accurate phosphoproteome analysis
SH Payne, M Yau, MB Smolka, S Tanner, H Zhou, V Bafna
Journal of proteome research 7 (8), 3373-3381, 2008
562008
PECAN: library-free peptide detection for data-independent acquisition tandem mass spectrometry data
YS Ting, JD Egertson, JG Bollinger, BC Searle, SH Payne, WS Noble, ...
Nature methods 14 (9), 903, 2017
552017
Proteogenomic strategies for identification of aberrant cancer peptides using large‐scale next‐generation sequencing data
S Woo, SW Cha, S Na, C Guest, T Liu, RD Smith, KD Rodland, S Payne, ...
Proteomics 14 (23-24), 2719-2730, 2014
552014
The abundant marine bacterium Pelagibacter simultaneously catabolizes dimethylsulfoniopropionate to the gases dimethyl sulfide and methanethiol
J Sun, JD Todd, JC Thrash, Y Qian, MC Qian, B Temperton, J Guo, ...
Nature microbiology 1 (8), 1-5, 2016
502016
Systematic analysis of splice-site-creating mutations in cancer
RG Jayasinghe, S Cao, Q Gao, MC Wendl, NS Vo, SM Reynolds, Y Zhao, ...
Cell reports 23 (1), 270-281. e3, 2018
472018
Archaeosortases and exosortases: widely distributed systems linking membrane transit with posttranslational modification.
DH Haft, SH Payne, JD Selengut
Journal of Bacteriology, JB. 06026-11v1, 2011
472011
A structural examination and collision cross section database for over 500 metabolites and xenobiotics using drift tube ion mobility spectrometry
X Zheng, NA Aly, Y Zhou, KT Dupuis, A Bilbao, VL Paurus, DJ Orton, ...
Chemical science 8 (11), 7724-7736, 2017
462017
Informed-Proteomics: open-source software package for top-down proteomics
J Park, PD Piehowski, C Wilkins, M Zhou, J Mendoza, GM Fujimoto, ...
Nature methods 14 (9), 909-914, 2017
422017
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