Lars Arvestad
Lars Arvestad
Stockholm University; Dept of Mathematics; Swedish e-Science Research Center, and SciLifeLab
Verified email at math.su.se - Homepage
Title
Cited by
Cited by
Year
The Norway spruce genome sequence and conifer genome evolution
B Nystedt, NR Street, A Wetterbom, A Zuccolo, YC Lin, DG Scofield, ...
Nature 497 (7451), 579-584, 2013
10342013
Bayesian gene/species tree reconciliation and orthology analysis using MCMC
L Arvestad, AC Berglund, J Lagergren, B Sennblad
Bioinformatics 19 (suppl 1), i7, 2003
2012003
Simultaneous Bayesian gene tree reconstruction and reconciliation analysis
Ö Åkerborg, B Sennblad, L Arvestad, J Lagergren
Proceedings of the National Academy of Sciences 106 (14), 5714, 2009
1822009
Evolution after gene duplication: models, mechanisms, sequences, systems, and organisms
C Roth, S Rastogi, L Arvestad, K Dittmar, S Light, D Ekman, DA Liberles
Journal of Experimental Zoology Part B: Molecular and Developmental …, 2007
1782007
The genome sequence of black cottonwood (Populus trichocarpa) reveals 18 conserved cellulose synthase (CesA) genes
S Djerbi, M Lindskog, L Arvestad, F Sterky, TT Teeri
Planta 221 (5), 739-746, 2005
1542005
Gene tree reconstruction and orthology analysis based on an integrated model for duplications and sequence evolution
L Arvestad, AC Berglund, J Lagergren, B Sennblad
Proceedings of the eighth annual international conference on Research in …, 2004
1512004
BESST-Efficient scaffolding of large fragmented assemblies
K Sahlin, F Vezzi, B Nystedt, J Lundeberg, L Arvestad
BMC Bioinformatics 15 (1), 281, 2014
1052014
Genome-wide survey for biologically functional pseudogenes
Ö Svensson, L Arvestad, J Lagergren
PLoS Comput Biol 2 (5), e46, 2006
962006
The gene evolution model and computing its associated probabilities
L Arvestad, J Lagergren, B Sennblad
Journal of the ACM (JACM) 56 (2), 7, 2009
862009
MAP20, a microtubule-associated protein in the secondary cell walls of hybrid aspen, is a target of the cellulose synthesis inhibitor 2, 6-dichlorobenzonitrile
AS Rajangam, M Kumar, H Aspeborg, G Guerriero, L Arvestad, P Pansri, ...
Plant physiology 148 (3), 1283-1294, 2008
762008
A Bayesian method for analyzing lateral gene transfer
J Sjöstrand, A Tofigh, V Daubin, L Arvestad, B Sennblad, J Lagergren
Systematic Biology 63 (3), 409-420, 2014
712014
GAM-NGS: genomic assemblies merger for next generation sequencing
R Vicedomini, F Vezzi, S Scalabrin, L Arvestad, A Policriti
BMC Bioinformatics 14 (Suppl 7), S6, 2013
652013
mtDNA tandem repeats in domestic dogs and wolves: mutation mechanism studied by analysis of the sequence of imperfect repeats
P Savolainen, L Arvestad, J Lundeberg
Molecular biology and evolution 17 (4), 474-488, 2000
622000
Classification of DNA sequences using Bloom filters
H Stranneheim, M Käller, T Allander, B Andersson, L Arvestad, ...
Bioinformatics 26 (13), 1595-1600, 2010
612010
DLRS: gene tree evolution in light of a species tree
J Sjöstrand, B Sennblad, L Arvestad, J Lagergren
Bioinformatics 28 (22), 2994-2995, 2012
382012
A novel method for forensic DNA investigations: repeat-type sequence analysis of tandemly repeated mtDNA in domestic dogs
P Savolainen, L Arvestad, J Lundberg
Journal of Forensic Science 45 (5), 990-999, 2000
292000
GenPhyloData: realistic simulation of gene family evolution
J Sjöstrand, L Arvestad, J Lagergren, B Sennblad
BMC Bioinformatics 14 (1), 209, 2013
282013
Identification of the cellulose synthase genes from the Oomycete Saprolegnia monoica and effect of cellulose synthesis inhibitors on gene expression and enzyme activity
J Fugelstad, J Bouzenzana, S Djerbi, G Guerriero, I Ezcurra, TT Teeri, ...
Fungal Genetics and Biology 46 (10), 759-767, 2009
282009
ESTs from brain and testis of White Leghorn and red junglefowl: annotation, bioinformatic classification of unknown transcripts and analysis of expression levels
P Savolainen, C Fitzsimmons, L Arvestad, L Andersson, J Lundeberg
Cytogenetic and genome research 111 (1), 79-87, 2005
272005
Improved gap size estimation for scaffolding algorithms
K Sahlin, N Street, J Lundeberg, L Arvestad
Bioinformatics 28 (17), 2215-2222, 2012
262012
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Articles 1–20