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Joshua Der
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Phylotranscriptomic analysis of the origin and early diversification of land plants
NJ Wickett, S Mirarab, N Nguyen, T Warnow, E Carpenter, N Matasci, ...
Proceedings of the National Academy of Sciences 111 (45), E4859-E4868, 2014
11802014
One thousand plant transcriptomes and the phylogenomics of green plants
Nature 574 (7780), 679-685, 2019
11422019
The Amborella Genome and the Evolution of Flowering Plants
Amborella Genome Project
Science 342 (6165), 1241089, 2013
663*2013
Data access for the 1,000 Plants (1KP) project
N Matasci, LH Hung, Z Yan, EJ Carpenter, NJ Wickett, S Mirarab, ...
GigaScience 3, 17, 2014
5782014
The butterfly plant arms-race escalated by gene and genome duplications
PP Edger, HM Heidel-Fischer, M Bekaert, J Rota, G GlŲckner, AE Platts, ...
Proceedings of the National Academy of Sciences 112 (27), 8362-8366, 2015
4622015
Fern genomes elucidate land plant evolution and cyanobacterial symbioses
FW Li, P Brouwer, L Carretero-Paulet, S Cheng, J De Vries, PM Delaux, ...
Nature plants 4 (7), 460-472, 2018
3822018
Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.)
R Ming, R VanBuren, Y Liu, M Yang, Y Han, L Li, Q Zhang, MJ Kim, ...
Genome Biology 14, R41, 2013
3672013
A revised classification of Santalales
DL Nickrent, V Malťcot, R Vidal-Russell, JP Der
Taxon 59 (2), 538-558, 2010
3222010
Horizontal transfer of an adaptive chimeric photoreceptor from bryophytes to ferns
FW Li, JC Villarreal, S Kelly, CJ Rothfels, M Melkonian, E Frangedakis, ...
Proceedings of the National Academy of Sciences 111 (18), 6672-6677, 2014
1722014
A molecular phylogeny of Santalaceae (Santalales)
JP Der, DL Nickrent
Systematic Botany 33 (1), 107-116, 2008
1632008
De novo characterization of the gametophyte transcriptome in bracken fern, Pteridium aquilinum
J Der, M Barker, N Wickett, C dePamphilis, P Wolf
BMC Genomics 12, 99, 2011
1582011
Comparative transcriptome analyses reveal core parasitism genes and suggest gene duplication and repurposing as sources of structural novelty
Z Yang, EK Wafula, LA Honaas, H Zhang, M Das, M Fernandez-Aparicio, ...
Molecular Biology and Evolution 32 (3), 767-790, 2014
1402014
Selecting Superior De Novo Transcriptome Assemblies: Lessons Learned by Leveraging the Best Plant Genome
LA Honaas, EK Wafula, NJ Wickett, JP Der, Y Zhang, PP Edger, ...
PloS one 11 (1), e0146062, 2016
1212016
Genome sequence of Striga asiatica provides insight into the evolution of plant parasitism
S Yoshida, S Kim, EK Wafula, J Tanskanen, YM Kim, L Honaas, Z Yang, ...
Current Biology 29 (18), 3041-3052. e4, 2019
1192019
Global chloroplast phylogeny and biogeography of bracken (Pteridium; Dennstaedtiaceae)
JP Der, JA Thomson, JK Stratford, PG Wolf
American Journal of Botany 96 (5), 1041-1049, 2009
1192009
Assembly and Validation of the Genome of the Nonmodel Basal Angiosperm Amborella
S Chamala, AS Chanderbali, JP Der, T Lan, B Walts, VA Albert, ...
Science 342 (6165), 1516-1517, 2013
1132013
Single-copy nuclear genes place haustorial Hydnoraceae within Piperales and reveal a Cretaceous origin of multiple parasitic angiosperm lineages
J Naumann, K Salomo, JP Der, EK Wafula, JF Bolin, E Maass, L Frenzke, ...
PLoS One 8 (11), e79204, 2013
1062013
The evolution of chloroplast genes and genomes in ferns
PG Wolf, JP Der, AM Duffy, JB Davidson, AL Grusz, KM Pryer
Plant Molecular Biology 76 (3), 251-261, 2011
1032011
Phylogenetic relationships of Santalales with insights into the origins of holoparasitic Balanophoraceae
HJ Su, JM Hu, FE Anderson, JP Der, DL Nickrent
Taxon 64 (3), 491-506, 2015
1022015
Discovery of the photosynthetic relatives of the "Maltese mushroom" Cynomorium
D Nickrent, J Der, F Anderson
BMC Evolutionary Biology 5, 38, 2005
97*2005
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Articles 1–20