| Single-molecule DNA polymerase dynamics at a bacterial replisome in live cells Y Liao, Y Li, JW Schroeder, LA Simmons, JS Biteen Biophysical journal 111 (12), 2562-2569, 2016 | 57 | 2016 |
| High-throughput cryo-EM enabled by user-free preprocessing routines Y Li, JN Cash, JJG Tesmer, MA Cianfrocco Structure 28 (7), 858-869. e3, 2020 | 49 | 2020 |
| SMALL-LABS: measuring single-molecule intensity and position in obscuring backgrounds BP Isaacoff, Y Li, SA Lee, JS Biteen Biophysical Journal 116 (6), 975-982, 2019 | 38 | 2019 |
| Visualizing bacterial DNA replication and repair with molecular resolution Y Li, JW Schroeder, LA Simmons, JS Biteen Current opinion in microbiology 43, 38-45, 2018 | 28 | 2018 |
| Dynamic exchange of two essential DNA polymerases during replication and after fork arrest Y Li, Z Chen, LA Matthews, LA Simmons, JS Biteen Biophysical journal 116 (4), 684-693, 2019 | 23 | 2019 |
| High-resolution cryo-EM using beam-image shift at 200 keV JN Cash, S Kearns, Y Li, MA Cianfrocco IUCrJ 7 (6), 1179-1187, 2020 | 15 | 2020 |
| CryoRL: reinforcement learning enables efficient cryo-EM data collection Q Fan, Y Li, Y Yao, J Cohn, S Liu, Z Xu, S Vos, M Cianfrocco Proceedings of the IEEE/CVF Winter Conference on Applications of Computer …, 2024 | 7 | 2024 |
| Smart data collection for CryoEM T Bepler, AJ Borst, J Bouvette, G Cannone, S Chen, A Cheng, A Cheng, ... Journal of Structural Biology 214 (4), 107913, 2022 | 5 | 2022 |
| CryoSTAR: leveraging structural prior and constraints for cryo-EM heterogeneous reconstruction Y Li, Y Zhou, J Yuan, F Ye, Q Gu bioRxiv, 2023.10. 31.564872, 2023 | 2 | 2023 |
| Optimized path planning surpasses human efficiency in cryo-EM imaging Y Li, Q Fan, Z Xu, ER Lee, J Cohn, V Demers, JY Lee, L Yip, ... biorxiv, 2022.06. 17.496614, 2022 | 2 | 2022 |
| Cloud computing platforms to support cryo-EM structure determination Y Li, MA Cianfrocco Trends in Biochemical Sciences 47 (2), 103-105, 2022 | 1 | 2022 |
| CryoSTAR: Cryo-EM Heterogeneous Reconstruction of Atomic Models with Structural Regularization Y Zhou, Y Li, J Yuan, YE Fei, Q Gu NeurIPS 2023 Workshop on New Frontiers of AI for Drug Discovery and Development, 2023 | | 2023 |
| Coupling Semi-supervised Learning with Reinforcement Learning for Better Decision Making---An application to Cryo-EM Data Collection Z Xu, Q Fan, Y Li, ER Lee, JM Cohn, A Tewari, SM Vos, M Cianfrocco NeurIPS 2023 AI for Science Workshop, 2023 | | 2023 |
