| Design of RNAs: comparing programs for inverse RNA folding A Churkin, MD Retwitzer, V Reinharz, Y Ponty, J Waldispühl, D Barash Briefings in bioinformatics 19 (2), 350-358, 2018 | 69 | 2018 |
| Deletion of a Single LeishIF4E-3 Allele by the CRISPR-Cas9 System Alters Cell Morphology and Infectivity of Leishmania R Shrivastava, N Tupperwar, M Drory-Retwitzer, M Shapira Msphere 4 (5), 10.1128/msphere. 00450-19, 2019 | 24 | 2019 |
| Nutritional stress targets LeishIF4E-3 to storage granules that contain RNA and ribosome components in Leishmania R Shrivastava, M Drory-Retwitzer, M Shapira PLoS Neglected Tropical Diseases 13 (3), e0007237, 2019 | 22 | 2019 |
| Phylogenomic and comparative analysis of the distribution and regulatory patterns of TPP riboswitches in fungi S Mukherjee, MD Retwitzer, D Barash, S Sengupta Scientific reports 8 (1), 5563, 2018 | 22 | 2018 |
| RiboD: a comprehensive database for prokaryotic riboswitches S Mukherjee, S Das Mandal, N Gupta, M Drory-Retwitzer, D Barash, ... Bioinformatics 35 (18), 3541-3543, 2019 | 21 | 2019 |
| incaRNAfbinv: a web server for the fragment-based design of RNA sequences M Drory Retwitzer, V Reinharz, Y Ponty, J Waldispühl, D Barash Nucleic acids research 44 (W1), W308-W314, 2016 | 17 | 2016 |
| RNAPattMatch: a web server for RNA sequence/structure motif detection based on pattern matching with flexible gaps M Drory Retwitzer, M Polishchuk, E Churkin, I Kifer, Z Yakhini, D Barash Nucleic acids research 43 (W1), W507-W512, 2015 | 17 | 2015 |
| An efficient minimum free energy structure-based search method for riboswitch identification based on inverse RNA folding M Drory Retwitzer, I Kifer, S Sengupta, Z Yakhini, D Barash PLoS One 10 (7), e0134262, 2015 | 16 | 2015 |
| incaRNAfbinv 2.0: a webserver and software with motif control for fragment-based design of RNAs MD Retwitzer, V Reinharz, A Churkin, Y Ponty, J Waldispühl, D Barash Bioinformatics 36 (9), 2920-2922, 2020 | 5 | 2020 |
| A computational approach for the identification of distant homologs of bacterial riboswitches based on inverse RNA folding S Mukherjee, MD Retwitzer, SM Hubbell, MM Meyer, D Barash Briefings in Bioinformatics 24 (3), bbad110, 2023 | 2 | 2023 |
| Phylogenomic and comparative analysis of the distribution and regulatory patterns of TPP riboswitches in fungi. SM Sumit Mukherjee, MD Retwitzer, D Barash, SS Supratim Sengupta | | 2018 |
Jérôme WaldispühlAssociate Professor of Computer Science, McGill UniversityVerified email at mcgill.ca
