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Tommaso Alfonsi
Tommaso Alfonsi
PhD candidate - Department of Electronics, Information and Bioengineering - Politecnico di MIlano
Verified email at polimi.it
Title
Cited by
Cited by
Year
ViruSurf: an integrated database to investigate viral sequences
A Canakoglu, P Pinoli, A Bernasconi, T Alfonsi, DP Melidis, S Ceri
Nucleic acids research 49 (D1), D817-D824, 2021
492021
VirusViz: comparative analysis and effective visualization of viral nucleotide and amino acid variants
A Bernasconi, A Gulino, T Alfonsi, A Canakoglu, P Pinoli, A Sandionigi, ...
Nucleic Acids Research 49 (15), e90-e90, 2021
212021
CoV2K: A Knowledge Base of SARS-CoV-2 Variant Impacts
R Al Khalaf, T Alfonsi, S Ceri, A Bernasconi
Research Challenges in Information Science: 15th International Conference …, 2021
162021
CoV2K model, a comprehensive representation of SARS-CoV-2 knowledge and data interplay
T Alfonsi, R Al Khalaf, S Ceri, A Bernasconi
Scientific Data 9 (1), 1-12, 2022
112022
EpiSurf: metadata-driven search server for analyzing amino acid changes within epitopes of SARS-CoV-2 and other viral species
A Bernasconi, L Cilibrasi, R Al Khalaf, T Alfonsi, S Ceri, P Pinoli, ...
Database 2021, baab059, 2021
102021
Report on Omicron Spike mutations on epitopes and immunological/epidemiological/kinetics effects from literature
A Bernasconi, P Pinoli, R Al Khalaf, T Alfonsi, A Canakoglu, L Cilibrasi, ...
Availabe online: https://virological. org/t/report-on-omicron-spike …, 2021
72021
High Performance Integration Pipeline for Viral and Epitope Sequences
T Alfonsi, P Pinoli, A Canakoglu
BioTech 11 (1), 7, 2022
52022
Genomic data integration and user-defined sample-set extraction for population variant analysis
T Alfonsi, A Bernasconi, A Canakoglu, M Masseroli
BMC bioinformatics 23 (1), 1-33, 2022
32022
Data-driven recombination detection in viral genomes
T Alfonsi, A Bernasconi, M Chiara, S Ceri
bioRxiv, 2023.06. 05.543733, 2023
22023
Expressing Biological Problems with Logical Reasoning Languages
T Alfonsi, L Bellomarini, A Bernasconi, S Ceri
CEUR WORKSHOP PROCEEDINGS 3229, 1-15, 2022
12022
VirusViz supplementary data
A Bernasconi, A Gulino, T Alfonsi, A Canakoglu, P Pinoli, A Sandionigi, ...
2021
A unique approach to SARS-CoV-2 data and knowledge ingestion, integration and querying
A Bernasconi, R Al Khalaf, T Alfonsi, A Canakoglu, L Cilibrasi, A Gulino, ...
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