Aleksei Aksimentiev
Aleksei Aksimentiev
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Cited by
Cited by
Imaging α-hemolysin with molecular dynamics: ionic conductance, osmotic permeability, and the electrostatic potential map
A Aksimentiev, K Schulten
Biophysical journal 88 (6), 3745-3761, 2005
Sizing DNA using a nanometer-diameter pore
JB Heng, C Ho, T Kim, R Timp, A Aksimentiev, YV Grinkova, S Sligar, ...
Biophysical journal 87 (4), 2905-2911, 2004
Microscopic kinetics of DNA translocation through synthetic nanopores
A Aksimentiev, JB Heng, G Timp, K Schulten
Biophysical journal 87 (3), 2086-2097, 2004
Orientation discrimination of single-stranded DNA inside the α-hemolysin membrane channel
J Mathé, A Aksimentiev, DR Nelson, K Schulten, A Meller
Proceedings of the National Academy of Sciences 102 (35), 12377-12382, 2005
Water− silica force field for simulating nanodevices
ER Cruz-Chu, A Aksimentiev, K Schulten
The Journal of Physical Chemistry B 110 (43), 21497-21508, 2006
Slowing down DNA translocation through a nanopore in lithium chloride
SW Kowalczyk, DB Wells, A Aksimentiev, C Dekker
Nano letters 12 (2), 1038-1044, 2012
The electromechanics of DNA in a synthetic nanopore
JB Heng, A Aksimentiev, C Ho, P Marks, YV Grinkova, S Sligar, ...
Biophysical journal 90 (3), 1098-1106, 2006
Assessing graphene nanopores for sequencing DNA
DB Wells, M Belkin, J Comer, A Aksimentiev
Nano letters 12 (8), 4117-4123, 2012
Simulation of the electric response of DNA translocation through a semiconductor nanopore–capacitor
ME Gracheva, A Xiong, A Aksimentiev, K Schulten, G Timp, JP Leburton
Nanotechnology 17 (3), 622, 2006
Stretching DNA using the electric field in a synthetic nanopore
JB Heng, A Aksimentiev, C Ho, P Marks, YV Grinkova, S Sligar, ...
Nano letters 5 (10), 1883-1888, 2005
Improved Parametrization of Li+, Na+, K+, and Mg2+ Ions for All-Atom Molecular Dynamics Simulations of Nucleic Acid Systems
J Yoo, A Aksimentiev
The journal of physical chemistry letters 3 (1), 45-50, 2012
Detection of DNA sequences using an alternating electric field in a nanopore capacitor
G Sigalov, J Comer, G Timp, A Aksimentiev
Nano letters 8 (1), 56-63, 2008
Insights into the molecular mechanism of rotation in the Fo sector of ATP synthase
A Aksimentiev, IA Balabin, RH Fillingame, K Schulten
Biophysical journal 86 (3), 1332-1344, 2004
Deciphering ionic current signatures of DNA transport through a nanopore
A Aksimentiev
Nanoscale 2 (4), 468-483, 2010
Modeling and simulation of ion channels
C Maffeo, S Bhattacharya, J Yoo, D Wells, A Aksimentiev
Chemical reviews 112 (12), 6250-6284, 2012
Electro-osmotic screening of the DNA charge in a nanopore
B Luan, A Aksimentiev
Physical Review E 78 (2), 021912, 2008
Detecting SNPs using a synthetic nanopore
Q Zhao, G Sigalov, V Dimitrov, B Dorvel, U Mirsaidov, S Sligar, ...
Nano letters 7 (6), 1680-1685, 2007
Ultrafast dynamics and spectroscopy of bacterial photosynthetic reaction centers
SH Lin, CH Chang, KK Liang, R Chang, JM Zhang, TS Yang, M Hayashi, ...
Advances in chemical physics 121, 1-88, 2002
Exploring transmembrane transport through -hemolysin with grid-steered molecular dynamics
DB Wells, V Abramkina, A Aksimentiev
The Journal of chemical physics 127 (12), 09B619, 2007
Nanopore sequencing: electrical measurements of the code of life
W Timp, UM Mirsaidov, D Wang, J Comer, A Aksimentiev, G Timp
IEEE transactions on nanotechnology 9 (3), 281-294, 2010
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