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Robert Davey
Robert Davey
Director of Technology, The Carpentries
Verified email at carpentries.org - Homepage
Title
Cited by
Cited by
Year
Population genomics of domestic and wild yeasts
G Liti, DM Carter, AM Moses, J Warringer, L Parts, SA James, RP Davey, ...
Nature 458 (7236), 337-341, 2009
16362009
An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations
BJ Clavijo, L Venturini, C Schudoma, GG Accinelli, G Kaithakottil, J Wright, ...
Genome research 27 (5), 885-896, 2017
4092017
Sequencing quality assessment tools to enable data-driven informatics for high throughput genomics
RM Leggett, RH Ramirez-Gonzalez, BJ Clavijo, D Waite, RP Davey
Frontiers in genetics 4, 288, 2013
1982013
Population genomic analysis of Aegilops tauschii identifies targets for bread wheat improvement
K Gaurav, S Arora, P Silva, J Sánchez-Martín, R Horsnell, L Gao, GS Brar, ...
Nature biotechnology 40 (3), 422-431, 2022
1132022
Repetitive sequence variation and dynamics in the ribosomal DNA array of Saccharomyces cerevisiae as revealed by whole-genome resequencing
SA James, MJT O'Kelly, DM Carter, RP Davey, A van Oudenaarden, ...
Genome Research 19 (4), 626-635, 2009
1062009
NanoOK: multi-reference alignment analysis of nanopore sequencing data, quality and error profiles
RM Leggett, D Heavens, M Caccamo, MD Clark, RP Davey
Bioinformatics 32 (1), 142-144, 2016
832016
CropSight: a scalable and open-source information management system for distributed plant phenotyping and IoT-based crop management
D Reynolds, J Ball, A Bauer, R Davey, S Griffiths, J Zhou
Gigascience 8 (3), giz009, 2019
692019
CerealsDB 3.0: expansion of resources and data integration
PA Wilkinson, MO Winfield, GLA Barker, S Tyrrell, X Bian, AM Allen, ...
BMC bioinformatics 17, 1-9, 2016
482016
Standards recommendations for the earth BioGenome project
MKN Lawniczak, R Durbin, P Flicek, K Lindblad-Toh, X Wei, JM Archibald, ...
Proceedings of the National Academy of Sciences 119 (4), e2115639118, 2022
462022
Data management and best practice for plant science
S Leonelli, RP Davey, E Arnaud, G Parry, R Bastow
Nature Plants 3 (6), 1-4, 2017
442017
An open science peer review oath
J Aleksic, A Alexa, TK Attwood, NC Hong, M Dahlö, R Davey, H Dinkel, ...
F1000Research 3, 2014
412014
Norwich COVID-19 testing initiative pilot: evaluating the feasibility of asymptomatic testing on a university campus
TB Gillam, J Cole, K Gharbi, E Angiolini, T Barker, P Bickerton, T Brabbs, ...
Journal of Public Health 43 (1), 82-88, 2021
402021
Ribosomal DNA sequence heterogeneity reflects intraspecies phylogenies and predicts genome structure in two contrasting yeast species
C West, SA James, RP Davey, J Dicks, IN Roberts
Systematic Biology 63 (4), 543-554, 2014
352014
LotuS2: an ultrafast and highly accurate tool for amplicon sequencing analysis
E Özkurt, J Fritscher, N Soranzo, DYK Ng, RP Davey, M Bahram, ...
Microbiome 10 (1), 1-14, 2022
332022
COPO: a metadata platform for brokering FAIR data in the life sciences
F Shaw, A Etuk, A Minotto, A Gonzalez-Beltran, D Johnson, ...
F1000Research 9 (495), 495, 2020
272020
StatsDB: platform-agnostic storage and understanding of next generation sequencing run metrics
RH Ramirez-Gonzalez, RM Leggett, D Waite, A Thanki, N Drou, ...
F1000Research 2, 2013
232013
Developing data interoperability using standards: a wheat community use case
ED Yeumo, M Alaux, E Arnaud, S Aubin, U Baumann, P Buche, L Cooper, ...
F1000Research 6, 2017
212017
ISA API: An open platform for interoperable life science experimental metadata
D Johnson, D Batista, K Cochrane, RP Davey, A Etuk, A Gonzalez-Beltran, ...
GigaScience 10 (9), giab060, 2021
192021
Data management challenges for artificial intelligence in plant and agricultural research
HF Williamson, J Brettschneider, M Caccamo, RP Davey, C Goble, ...
F1000Research 10, 2021
192021
Leaf LIMS: A flexible laboratory information management system with a synthetic biology focus
T Craig, R Holland, R D’Amore, JR Johnson, HV McCue, A West, ...
ACS synthetic biology 6 (12), 2273-2280, 2017
182017
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