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Joel Mallory
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Metallophilic interactions from dispersion-corrected density-functional theory
A Otero-de-la-Roza, JD Mallory, ER Johnson
The Journal of Chemical Physics 140 (18), 2014
592014
Diffusion Monte Carlo studies of MB-pol (H2O) 2− 6 and (D2O) 2− 6 clusters: Structures and binding energies
JD Mallory, VA Mandelshtam
The Journal of Chemical Physics 145 (6), 2016
532016
Trade-offs between error, speed, noise, and energy dissipation in biological processes with proofreading
JD Mallory, AB Kolomeisky, OA Igoshin
The Journal of Physical Chemistry B 123 (22), 4718-4725, 2019
382019
Assessing the performance of the diffusion Monte Carlo method as applied to the water monomer, dimer, and hexamer
JD Mallory, SE Brown, VA Mandelshtam
The Journal of Physical Chemistry A 119 (24), 6504-6515, 2015
252015
Do we understand the mechanisms used by biological systems to correct their errors?
JD Mallory, OA Igoshin, AB Kolomeisky
The Journal of Physical Chemistry B 124 (42), 9289-9296, 2020
132020
Trade-Offs between Speed, Accuracy, and Dissipation in tRNAIle Aminoacylation
Q Yu, JD Mallory, AB Kolomeisky, J Ling, OA Igoshin
The journal of physical chemistry letters 11 (10), 4001-4007, 2020
132020
Quantum Melting and Isotope Effects from Diffusion Monte Carlo Studies of p-H2 Clusters
JD Mallory, VA Mandelshtam
The Journal of Physical Chemistry A 121 (33), 6341-6348, 2017
132017
Nuclear Quantum Effects and Thermodynamic Properties for Small (H2O)1–21X Clusters (X = F, Cl, Br, I)
JD Mallory, VA Mandelshtam
The Journal of Physical Chemistry A 122 (16), 4167-4180, 2018
122018
Binding energies from diffusion Monte Carlo for the MB-pol H2O and D2O dimer: A comparison to experimental values
JD Mallory, VA Mandelshtam
The Journal of Chemical Physics 143 (14), 2015
112015
Reduced-density-matrix-based ab initio cavity quantum electrodynamics
JD Mallory, AE DePrince III
Physical Review A 106 (5), 053710, 2022
102022
Kinetic control of stationary flux ratios for a wide range of biochemical processes
JD Mallory, AB Kolomeisky, OA Igoshin
Proceedings of the National Academy of Sciences 117 (16), 8884-8889, 2020
62020
Theoretical analysis reveals the cost and benefit of proofreading in coronavirus genome replication
JD Mallory, XF Mallory, AB Kolomeisky, OA Igoshin
The Journal of Physical Chemistry Letters 12 (10), 2691-2698, 2021
52021
Quantum-induced solid-solid transitions and melting in the Lennard-Jones LJ38 cluster
JD Mallory, VA Mandelshtam
The Journal of Chemical Physics 149 (10), 2018
52018
Synergy among Pausing, Intrinsic Proofreading, and Accessory Proteins Results in Optimal Transcription Speed and Tolerable Accuracy
T Midha, JD Mallory, AB Kolomeisky, OA Igoshin
The Journal of Physical Chemistry Letters 14 (14), 3422-3429, 2023
12023
Magic numbers, quantum delocalization, and orientational disordering in anionic hydrogen and deuterium clusters
BH Kohno, JD Mallory, VA Mandelshtam
The Journal of Chemical Physics 150 (20), 2019
12019
Correction to “Trade-Offs between Error, Speed, Noise, and Energy Dissipation in Biological Processes with Proofreading”
JD Mallory, AB Kolomeisky, OA Igoshin
The Journal of Physical Chemistry B 124 (44), 9974-9974, 2020
2020
Diffusion Monte Carlo Studies of Small Clusters
JD Mallory
UC Irvine, 2018
2018
Supporting Information: Trade-Offs between Error, Speed, Noise and Energy Dissipation in Biological Processes with Proofreading
JD Mallory, AB Kolomeisky, OA Igoshin
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