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Bushra Raj
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A highly conserved program of neuronal microexons is misregulated in autistic brains
M Irimia, RJ Weatheritt, JD Ellis, NN Parikshak, ...
Cell 159 (7), 1511-1523, 2014
6032014
Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain
B Raj, DE Wagner, A McKenna, S Pandey, AM Klein, J Shendure, ...
Nature Biotechnology, 2018
5282018
Alternative splicing in the mammalian nervous system: recent insights into mechanisms and functional roles
B Raj, BJ Blencowe
Neuron 87 (1), 14-27, 2015
4452015
Regulation of vertebrate nervous system alternative splicing and development by an SR-related protein
JA Calarco, S Superina, D O'Hanlon, M Gabut, B Raj, Q Pan, U Skalska, ...
Cell 138 (5), 898-910, 2009
2492009
Cross-regulation between an alternative splicing activator and a transcription repressor controls neurogenesis
B Raj, D O'Hanlon, JP Vessey, Q Pan, D Ray, NJ Buckley, FD Miller, ...
Molecular cell 43 (5), 843-850, 2011
1682011
An alternative splicing event amplifies evolutionary differences between vertebrates
S Gueroussov, T Gonatopoulos-Pournatzis, M Irimia, B Raj, ZY Lin, ...
Science 349 (6250), 868-873, 2015
1492015
A global regulatory mechanism for activating an exon network required for neurogenesis
B Raj, M Irimia, U Braunschweig, T Sterne-Weiler, D O’Hanlon, ZY Lin, ...
Molecular cell 56 (1), 90-103, 2014
1472014
Genome-wide CRISPR-Cas9 Interrogation of Splicing Networks Reveals a Mechanism for Recognition of Autism-Misregulated Neuronal Microexons
T Gonatopoulos-Pournatzis, M Wu, U Braunschweig, J Roth, H Han, ...
Molecular Cell 72 (3), 510-524. e12, 2018
1032018
Large-scale reconstruction of cell lineages using single-cell readout of transcriptomes and CRISPR–Cas9 barcodes by scGESTALT
B Raj, JA Gagnon, AF Schier
Nature protocols 13 (11), 2685-2713, 2018
652018
Emergence of neuronal diversity during vertebrate brain development
B Raj, JA Farrell, J Liu, J El Kholtei, AN Carte, JN Acedo, LY Du, ...
Neuron 108 (6), 1058-1074. e6, 2020
562020
Modulation and detection of a neuronal alternative splicing regulatory network for treatment and diagnosis of neurological disorders
BJ Blencowe, M Quesnel-Vallieres, M Irimia, B Raj, SP Cordes
US Patent 10,772,928, 2020
12020
Tracing developmental lineages
B Raj
Nature Methods 20 (12), 1852-1854, 2023
2023
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