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Dusan Petrovic
Dusan Petrovic
Verified email at astrazeneca.com - Homepage
Title
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Cited by
Year
Conformational dynamics and enzyme evolution
D Petrović, VA Risso, SCL Kamerlin, JM Sanchez-Ruiz
Journal of the Royal Society Interface 15 (144), 20180330, 2018
1662018
Loop motion in triosephosphate isomerase is not a simple open and shut case
Q Liao, Y Kulkarni, U Sengupta, D Petrović, AJ Mulholland, ...
Journal of the American Chemical Society 140 (46), 15889-15903, 2018
802018
The evolution of multiple active site configurations in a designed enzyme
NS Hong, D Petrović, R Lee, G Gryn’ova, M Purg, J Saunders, P Bauer, ...
Nature communications 9 (1), 3900, 2018
772018
Shuffling active site substate populations affects catalytic activity: the case of glucose oxidase
D Petrović, D Frank, SCL Kamerlin, K Hoffmann, B Strodel
ACS catalysis 7 (9), 6188-6197, 2017
542017
DNP-enhanced MAS NMR: a tool to snapshot conformational ensembles of α-synuclein in different states
B Uluca, T Viennet, D Petrović, H Shaykhalishahi, F Weirich, A Gönülalan, ...
Biophysical journal 114 (7), 1614-1623, 2018
472018
Enzyme architecture: Modeling the operation of a hydrophobic clamp in catalysis by triosephosphate isomerase
YS Kulkarni, Q Liao, D Petrović, DM Krüger, B Strodel, TL Amyes, ...
Journal of the American Chemical Society 139 (30), 10514-10525, 2017
462017
Interaction of carbohydrate-binding modules with poly (ethylene terephthalate)
J Weber, D Petrović, B Strodel, SHJ Smits, S Kolkenbrock, C Leggewie, ...
Applied microbiology and biotechnology 103, 4801-4812, 2019
422019
Molecular modeling of conformational dynamics and its role in enzyme evolution
P Dušan, KSC Lynn
Current opinion in structural biology 52, 50-57, 2018
342018
Short and simple sequences favored the emergence of N-helix phospho-ligand binding sites in the first enzymes
LM Longo, D Petrović, SCL Kamerlin, DS Tawfik
Proceedings of the National Academy of Sciences 117 (10), 5310-5318, 2020
312020
Challenges and advances in the computational modeling of biological phosphate hydrolysis
D Petrović, K Szeler, SCL Kamerlin
Chemical Communications 54 (25), 3077-3089, 2018
272018
Heme-binding enables allosteric modulation in an ancient TIM-barrel glycosidase
G Gamiz-Arco, LI Gutierrez-Rus, VA Risso, B Ibarra-Molero, Y Hoshino, ...
Nature communications 12 (1), 380, 2021
232021
Simulation-guided design of cytochrome P450 for chemo-and regioselective macrocyclic oxidation
D Petrovic, A Bokel, M Allan, VB Urlacher, B Strodel
Journal of chemical information and modeling 58 (4), 848-858, 2018
202018
Stereo-and regioselectivity in catalyzed transformation of a 1, 2-disubstituted vicinal diol and the corresponding diketone by wild type and laboratory evolved alcohol …
D Maurer, TR Enugala, E Hamnevik, P Bauer, M Lüking, D Petrovic, ...
ACS Catalysis 8 (8), 7526-7538, 2018
192018
One‐Pot, Two‐Step Hydroxylation of the Macrocyclic Diterpenoid β‐Cembrenediol Catalyzed by P450 BM3 Mutants
P Le‐Huu, D Petrović, B Strodel, VB Urlacher
ChemCatChem 8 (24), 3755-3761, 2016
192016
Conformational sampling of the intrinsically disordered C-terminal tail of DERA is important for enzyme catalysis
M Schulte, D Petrović, P Neudecker, R Hartmann, J Pietruszka, S Willbold, ...
ACS catalysis 8 (5), 3971-3984, 2018
172018
Determining the capacity of unloading bulk cargo terminal using queuing theory
U Bugaric, D Petrovic, Z Petrovic, M Pajcin, G Markovic-Petrovic, ...
J Mech Eng Strojniški Vestnik 57, 405-416, 2011
152011
How accurately do force fields represent protein side chain ensembles?
D Petrović, X Wang, B Strodel
Proteins: Structure, Function, and Bioinformatics 86 (9), 935-944, 2018
142018
Virtual screening expands the non-natural amino acid palette for peptide optimization
KN Amarasinghe, L De Maria, C Tyrchan, LA Eriksson, J Sadowski, ...
Journal of Chemical Information and Modeling 62 (12), 2999-3007, 2022
82022
Empirical Valence Bond Simulations Suggest a Direct Hydride Transfer Mechanism for Human Diamine Oxidase
A Maršavelski, D Petrović, P Bauer, R Vianello, SCL Kamerlin
ACS omega 3 (4), 3665-3674, 2018
82018
Virtual screening in the cloud identifies potent and selective ROS1 kinase inhibitors
D Petrovic, JS Scott, MS Bodnarchuk, O Lorthioir, S Boyd, GM Hughes, ...
Journal of Chemical Information and Modeling 62 (16), 3832-3843, 2022
72022
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