Chris Oehmen
Title
Cited by
Cited by
Year
ScalaBLAST: a scalable implementation of BLAST for high-performance data-intensive bioinformatics analysis
C Oehmen, J Nieplocha
IEEE Transactions on Parallel and Distributed Systems 17 (8), 740-749, 2006
1852006
Computational prediction of type III and IV secreted effectors in gram-negative bacteria
JE McDermott, A Corrigan, E Peterson, C Oehmen, G Niemann, ...
Infection and immunity 79 (1), 23-32, 2011
1152011
ScalaBLAST 2.0: rapid and robust BLAST calculations on multiprocessor systems
CS Oehmen, DJ Baxter
Bioinformatics 29 (6), 797-798, 2013
672013
Inhibition of dengue virus infections in cell cultures and in AG129 mice by a small interfering RNA targeting a highly conserved sequence
DA Stein, ST Perry, MD Buck, CS Oehmen, MA Fischer, E Poore, JL Smith, ...
Journal of virology 85 (19), 10154-10166, 2011
572011
A support vector machine model for the prediction of proteotypic peptides for accurate mass and time proteomics
BJM Webb-Robertson, WR Cannon, CS Oehmen, AR Shah, ...
Bioinformatics 24 (13), 1503-1509, 2008
562008
SVM-HUSTLE—an iterative semi-supervised machine learning approach for pairwise protein remote homology detection
AR Shah, CS Oehmen, BJ Webb-Robertson
Bioinformatics 24 (6), 783-790, 2008
552008
A support vector machine model for the prediction of proteotypic peptides for accurate mass and time proteomics
BJM Webb-Robertson, WR Cannon, CS Oehmen, AR Shah, ...
Bioinformatics 26 (13), 1677-1683, 2010
452010
Comparison of probability and likelihood models for peptide identification from tandem mass spectrometry data
WR Cannon, KH Jarman, BJM Webb-Robertson, DJ Baxter, CS Oehmen, ...
Journal of proteome research 4 (5), 1687-1698, 2005
372005
Physicochemical property distributions for accurate and rapid pairwise protein homology detection
BJM Webb-Robertson, KG Ratuiste, CS Oehmen
BMC bioinformatics 11 (1), 1-8, 2010
302010
Biomolecular computation in virtual test tubes
MH Garzon, C Oehmen
International Workshop on DNA-Based Computers, 117-128, 2001
302001
SVM-BALSA: remote homology detection based on Bayesian sequence alignment
BJ Webb-Robertson, C Oehmen, M Matzke
Computational Biology and Chemistry 29 (6), 440-443, 2005
292005
Mathematical Model of the Rapidly Activating Delayed Rectifier Potassium Current IKr in Rabbit Sinoatrial Node
CS Oehmen, WR Giles, SS Demir
Journal of cardiovascular electrophysiology 13 (11), 1131-1140, 2002
262002
A model of cyclic transcriptomic behavior in the cyanobacterium Cyanothece sp. ATCC 51142
JE McDermott, CS Oehmen, LA McCue, E Hill, DM Choi, J Stöckel, ...
Molecular BioSystems 7 (8), 2407-2418, 2011
252011
An organic model for detecting cyber-events
C Oehmen, E Peterson, S Dowson
Proceedings of the Sixth Annual Workshop on Cyber Security and Information …, 2010
152010
Formal approach for resilient reachability based on end-system route agility
U Rauf, F Gillani, E Al-Shaer, M Halappanavar, S Chatterjee, C Oehmen
Proceedings of the 2016 ACM Workshop on Moving Target Defense, 117-127, 2016
132016
A feature vector integration approach for a generalized support vector machine pairwise homology algorithm
BJM Webb-Robertson, CS Oehmen, AR Shah
Computational biology and chemistry 32 (6), 458-461, 2008
92008
Evolutionary drift models for moving target defense
C Oehmen, E Peterson, J Teuton
Proceedings of the Eighth Annual Cyber Security and Information Intelligence …, 2013
82013
Proactive routing mutation against stealthy Distributed Denial of Service attacks: metrics, modeling, and analysis
Q Duan, E Al-Shaer, S Chatterjee, M Halappanavar, C Oehmen
The Journal of Defense Modeling and Simulation 15 (2), 219-230, 2018
72018
LINEBACkER: Bio-inspired data reduction toward real time network traffic analysis
J Teuton, E Peterson, D Nordwall, B Akyol, C Oehmen
2013 6th International Symposium on Resilient Control Systems (ISRCS), 170-174, 2013
72013
Integrating subcellular location for improving machine learning models of remote homology detection in eukaryotic organisms
AR Shah, CS Oehmen, J Harper, BJM Webb-Robertson
Computational biology and chemistry 31 (2), 138-142, 2007
72007
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Articles 1–20