Matteo Cereda
Matteo Cereda
Cancer Genomics and Bioinformatics - Italian Institute for Genomic Medicine (IIGM)
Verified email at - Homepage
Cited by
Cited by
Characterizing the RNA targets and position-dependent splicing regulation by TDP-43
JR Tollervey, T Curk, B Rogelj, M Briese, M Cereda, M Kayikci, J König, ...
Nature neuroscience 14 (4), 452-458, 2011
Both selective and neutral processes drive GC content evolution in the human genome
U Pozzoli, G Menozzi, M Fumagalli, M Cereda, GP Comi, R Cagliani, ...
BMC evolutionary biology 8 (1), 1-12, 2008
RNAmotifs: prediction of multivalent RNA motifs that control alternative splicing
M Cereda, U Pozzoli, G Rot, P Juvan, A Schweitzer, T Clark, J Ule
Genome biology 15 (1), 1-12, 2014
Synthetic lethal interaction between the tumour suppressor STAG2 and its paralog STAG1
L Benedetti, M Cereda, LA Monteverde, N Desai, FD Ciccarelli
Oncotarget 8 (23), 37619, 2017
Clinical and molecular characterization of a cohort of patients with novel nucleotide alterations of the Dystrophin gene detected by direct sequencing
F Magri, R Del Bo, MG D'Angelo, A Govoni, S Ghezzi, S Gandossini, ...
BMC medical genetics 12 (1), 1-12, 2011
Gene function and expression level influence the insertion/fixation dynamics of distinct transposon families in mammalian introns
M Sironi, G Menozzi, GP Comi, M Cereda, R Cagliani, N Bresolin, ...
Genome biology 7 (12), 1-15, 2006
Patients with genetically heterogeneous synchronous colorectal cancer carry rare damaging germline mutations in immune-related genes
M Cereda, G Gambardella, L Benedetti, F Iannelli, D Patel, G Basso, ...
Nature communications 7 (1), 1-12, 2016
GeCo++: a C++ library for genomic features computation and annotation in the presence of variants
M Cereda, M Sironi, M Cavalleri, U Pozzoli
Bioinformatics 27 (9), 1313-1315, 2011
A Comprehensive Bioinformatics Analysis of UBE2C in Cancers
H Dastsooz, M Cereda, D Donna, S Oliviero
International Journal of Molecular Science 20 (9), 2228, 2019
Patient-specific cancer genes contribute to recurrently perturbed pathways and establish therapeutic vulnerabilities in esophageal adenocarcinoma
TP Mourikis, L Benedetti, E Foxall, D Temelkovski, J Nulsen, J Perner, ...
Nature communications 10 (1), 1-17, 2019
A complex selection signature at the human AVPR1B gene
R Cagliani, M Fumagalli, U Pozzoli, S Riva, M Cereda, GP Comi, L Pattini, ...
BMC evolutionary biology 9 (1), 1-14, 2009
Genetic redundancy, functional compensation, and cancer vulnerability
M Cereda, TP Mourikis, FD Ciccarelli
Trends in cancer 2 (4), 160-162, 2016
Recessive cancer genes engage in negative genetic interactions with their functional paralogs
M D’Antonio, RF Guerra, M Cereda, S Marchesi, F Montani, F Nicassio, ...
Cell reports 5 (6), 1519-1526, 2013
Omic approaches to pediatric bone sarcomas
E Tirtei, M Cereda, E De Luna, P Quarello, SD Asaftei, F Fagioli
Pediatric blood & cancer 67 (2), e28072, 2020
MEGA-V: detection of variant gene sets in patient cohorts
G Gambardella, M Cereda, L Benedetti, FD Ciccarelli
Bioinformatics 33 (8), 1248-1249, 2017
Precision Medicine in Osteosarcoma: MATCH Trial and Beyond
E Tirtei, A Campello, SD Asaftei, K Mareschi, M Cereda, F Fagioli
Cells 10 (2), 281, 2021
Deep sequencing of the X chromosome reveals the proliferation history of colorectal adenomas
A De Grassi, F Iannelli, M Cereda, S Volorio, V Melocchi, A Viel, G Basso, ...
Genome biology 15 (8), 1-17, 2014
Identification of altered biological processes in heterogeneous RNA-sequencing data by discretization of expression profiles
A Lauria, S Peirone, MD Giudice, F Priante, P Rajan, M Caselle, ...
Nucleic acids research 48 (4), 1730-1747, 2020
Artificial Intelligence in Bulk and Single-Cell RNA-Sequencing Data to Foster Precision Oncology
M Del Giudice, S Peirone, S Perrone, F Priante, F Varese, E Tirtei, ...
International Journal of Molecular Sciences 22 (9), 4563, 2021
HaTSPiL: A modular pipeline for high-throughput sequencing data analysis
E Morandi, M Cereda, D Incarnato, C Parlato, G Basile, F Anselmi, ...
PloS one 14 (10), e0222512, 2019
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