Andrew Francis

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Mark TanakaUniversity of New South WalesVerified email at unsw.edu.au
Fabio LucianiProfessor, University of New South Wales, Sydney, AustraliaVerified email at unsw.edu.au
Prof. Mike SteelUniversity of Canterbury, New ZealandVerified email at canterbury.ac.nz
Scott SissonProfessor of Statistics & Data Science, University of New South WalesVerified email at unsw.edu.au
Attila Egri-NagyAssociate Professor of MathematicsVerified email at aiu.ac.jp
Volker GebhardtA/Prof, Centre for Research in Mathematics, Western Sydney UniversityVerified email at scm.uws.edu.au
Josephine ReyesSchool of Public Health and Community Medicine, University of New South WalesVerified email at unsw.edu.au
Sangeeta BhatiaImperial College LondonVerified email at ukhsa.gov.uk
Henry P WynnLondon School of Economics and Alan Turing Institute, LondonVerified email at lse.ac.uk
Jeremy G SumnerUniversity of TasmaniaVerified email at utas.edu.au
Mareike FischerProfessor for Biomathematics and Stochastics, University of Greifswald, GermanyVerified email at mareikefischer.de
Sara BallouzUNSWVerified email at unsw.edu.au
Professor Ruiting LanUniversity of New South WalesVerified email at unsw.edu.au
J. D. MitchellUniversity of St AndrewsVerified email at st-andrews.ac.uk
taoyang wuLecturer of Computational Biology, University of East AngliaVerified email at uea.ac.uk
Michael HendriksenUniversity of MelbourneVerified email at student.westernsydney.edu.au
Charles SempleProfessor of Mathematics, University of CanterburyVerified email at canterbury.ac.nz
James EastSenior lecturer in pure mathematics, University of Western SydneyVerified email at WesternSydney.edu.au
Laurence A. F. ParkSchool of Computer, Data and Mathematical Sciences, Western Sydney UniversityVerified email at scem.uws.edu.au
Barbara HollandSchool of Natural Sciences (Maths), University of Tasmania, HobartVerified email at utas.edu.au

Andrew Francis

School of Mathematics and Statistics, University of New South Wales, Sydney, Australia

Verified email at unsw.edu.au

phylogenetic networks algebraic biology combinatorics phylogenetics


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
The epidemiological fitness cost of drug resistance in Mycobacterium tuberculosis F Luciani, SA Sisson, H Jiang, AR Francis, MM Tanaka Proceedings of the National Academy of Sciences 106 (34), 14711-14715, 2009	196	2009
Using approximate Bayesian computation to estimate tuberculosis transmission parameters from genotype data MM Tanaka, AR Francis, F Luciani, SA Sisson Genetics 173 (3), 1511, 2006	196	2006
Which phylogenetic networks are merely trees with additional arcs? AR Francis, M Steel Systematic biology 64 (5), 768-777, 2015	123	2015
spolTools: online utilities for analyzing spoligotypes of the Mycobacterium tuberculosis complex C Tang, JF Reyes, F Luciani, AR Francis, MM Tanaka Bioinformatics 24 (20), 2414-2415, 2008	73	2008
Models of deletion for visualizing bacterial variation: an application to tuberculosis spoligotypes JF Reyes, AR Francis, MM Tanaka BMC bioinformatics 9, 1-16, 2008	67	2008
Conditions for the evolution of gene clusters in bacterial genomes S Ballouz, AR Francis, R Lan, MM Tanaka PLoS computational biology 6 (2), e1000672, 2010	58	2010
Detecting emerging strains of tuberculosis by using spoligotypes MM Tanaka, AR Francis Proceedings of the National Academy of Sciences 103 (41), 15266-15271, 2006	56	2006
Methods of quantifying and visualising outbreaks of tuberculosis using genotypic information MM Tanaka, AR Francis Infection, Genetics and Evolution 5 (1), 35-43, 2005	37	2005
Group-theoretic models of the inversion process in bacterial genomes A Egri-Nagy, V Gebhardt, MM Tanaka, AR Francis Journal of Mathematical Biology 69 (1), 243-265, 2014	33	2014
Tree-based unrooted phylogenetic networks A Francis, KT Huber, V Moulton Bulletin of mathematical biology 80, 404-416, 2018	30	2018
Interpreting genotype cluster sizes of Mycobacterium tuberculosis isolates typed with IS6110 and spoligotyping F Luciani, AR Francis, MM Tanaka Infection, Genetics and Evolution 8 (2), 182-190, 2008	30	2008
New characterisations of tree-based networks and proximity measures A Francis, C Semple, M Steel Advances in Applied Mathematics 93, 93-107, 2018	29	2018
Centres of Hecke algebras: the Dipper–James conjecture AR Francis, JJ Graham Journal of algebra 306 (1), 244-267, 2006	29	2006
The minimal basis for the centre of an Iwahori–Hecke algebra A Francis Journal of Algebra 221 (1), 1-28, 1999	27	1999
An algebraic view of bacterial genome evolution AR Francis Journal of mathematical biology 69 (6), 1693-1718, 2014	22	2014
Concentration of electrons at grain boundaries in TiO2 (rutile): Impact on charge transport and reactivity T Bak, D Chu, AR Francis, W Li, J Nowotny Catalysis Today 224, 200-208, 2014	20	2014
Position and content paradigms in genome rearrangements: the wild and crazy world of permutations in genomics S Bhatia, P Feijão, AR Francis Bulletin of Mathematical Biology 80, 3227-3246, 2018	19	2018
A representation-theoretic approach to the calculation of evolutionary distance in bacteria JG Sumner, PD Jarvis, AR Francis Journal of Physics A: Mathematical and Theoretical 50 (33), 335601, 2017	18	2017
Maximum likelihood estimates of pairwise rearrangement distances S Serdoz, A Egri-Nagy, J Sumner, BR Holland, PD Jarvis, MM Tanaka, ... Journal of theoretical biology 423, 31-40, 2017	18	2017
A discussion on the process of defining 2‐D separation selectivity PG Stevenson, M Mnatsakanyan, AR Francis, RA Shalliker Journal of separation science 33 (10), 1405-1413, 2010	17	2010

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